Uses of Interface
cage.EmbeddableGraph

Packages that use EmbeddableGraph
cage Contains the main classes for the Java GUI of CaGe. 
cage.viewer.jmol Provides an interface to Jmol that can be used to visualize graphs in CaGe. 
cage.viewer.twoview Contains the classes needed for TwoView
 

Uses of EmbeddableGraph in cage
 

Classes in cage that implement EmbeddableGraph
 class NativeEmbeddableGraph
           
 

Fields in cage declared as EmbeddableGraph
 EmbeddableGraph CaGeResult.graph
           
 

Methods in cage that return EmbeddableGraph
abstract  EmbeddableGraph CaGePipe.getGraph()
           
 EmbeddableGraph CaGeResult.getGraph()
           
 EmbeddableGraph CaGeResultList.getGraph()
           
 EmbeddableGraph NativeCaGePipe.getGraph()
           
 

Methods in cage with parameters of type EmbeddableGraph
 void CaGeResultList.addGraph(EmbeddableGraph graph, int graphNo)
           
abstract  void Embedder.embed2D(EmbeddableGraph graph)
           
abstract  void Embedder.embed3D(EmbeddableGraph graph)
           
 java.lang.String ElementRule.getElement(EmbeddableGraph graph, int vertex)
          Returns the chemical symbol of the chemical element of the atom corresponding with vertex in graph.
 java.lang.String SingleElementRule.getElement(EmbeddableGraph graph, int vertex)
          Returns the chemical symbol of the chemical element of the atom which will always be the element set on construction of this rule.
 java.lang.String ValencyElementRule.getElement(EmbeddableGraph graph, int vertex)
          Returns the chemical symbol of the chemical element of the atom corresponding with vertex in graph by looking up the element for the degree of vertex.
abstract  void Embedder.reembed2D(EmbeddableGraph graph)
           
 boolean Embedder.reembed2DRequired(EmbeddableGraph graph, float x, float y)
          Returns whether the graph needs to be reembedded for the point (x, y) to lie in the outer face or not.
 

Constructors in cage with parameters of type EmbeddableGraph
CaGeResult(EmbeddableGraph graph, int graphNo)
           
 

Uses of EmbeddableGraph in cage.viewer.jmol
 

Methods in cage.viewer.jmol that return EmbeddableGraph
 EmbeddableGraph CaGeJmolAdapter.getGraph()
           
 

Methods in cage.viewer.jmol with parameters of type EmbeddableGraph
 void CaGeJmolAdapter.setGraph(EmbeddableGraph graph)
           
 void JmolPanel.setGraph(EmbeddableGraph graph)
           
 

Uses of EmbeddableGraph in cage.viewer.twoview
 

Methods in cage.viewer.twoview with parameters of type EmbeddableGraph
 void TwoViewPainter.setGraph(EmbeddableGraph graph)