A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

abort() - Method in class cage.BackgroundRunner

abort() - Method in class cage.Embedder

abort() - Method in class cage.EmbedThread

abortCurrent() - Method in class cage.FoldnetThread

AboutJmolPanel - Class in cage.viewer.jmol

Panel that shows a short overview of information about Jmol.

AboutJmolPanel(JmolViewer) - Constructor for class cage.viewer.jmol.AboutJmolPanel

AbstractButtonGroup - Class in cage.utility

An implementation of GenericButtonGroup that uses a Vector.

AbstractButtonGroup() - Constructor for class cage.utility.AbstractButtonGroup

AbstractChemicalWriter - Class in cage.writer

AbstractChemicalWriter() - Constructor for class cage.writer.AbstractChemicalWriter

actionPerformed(ActionEvent) - Method in class cage.BackgroundWindow

actionPerformed(ActionEvent) - Method in class cage.CaGe

actionPerformed(ActionEvent) - Method in class cage.CaGeListener

actionPerformed(ActionEvent) - Method in class cage.CaGeStarter

actionPerformed(ActionEvent) - Method in class cage.CaGeTimer

actionPerformed(ActionEvent) - Method in class cage.FileFormatBox

actionPerformed(ActionEvent) - Method in class cage.generator.BoundaryHCgenPanel

actionPerformed(ActionEvent) - Method in class cage.generator.DiskTriangulationsPanel

actionPerformed(ActionEvent) - Method in class cage.generator.ExternalPanel

actionPerformed(ActionEvent) - Method in class cage.generator.FormulaHCgenPanel

actionPerformed(ActionEvent) - Method in class cage.generator.FullgenPanel

actionPerformed(ActionEvent) - Method in class cage.generator.GeneralPlaneGraphsPanel

actionPerformed(ActionEvent) - Method in class cage.generator.GeneralTriangulationsPanel

actionPerformed(ActionEvent) - Method in class cage.generator.NanoConesPanel

actionPerformed(ActionEvent) - Method in class cage.generator.SizeOption

actionPerformed(ActionEvent) - Method in class cage.generator.SizeOptionsMap

actionPerformed(ActionEvent) - Method in class cage.GeneratorChoiceListener

actionPerformed(ActionEvent) - Method in class cage.GeneratorParamsListener

actionPerformed(ActionEvent) - Method in class cage.OutputPanel

actionPerformed(ActionEvent) - Method in class cage.OutputParamsListener

actionPerformed(ActionEvent) - Method in class cage.ResultPanel

actionPerformed(ActionEvent) - Method in class cage.SaveDialog

actionPerformed(ActionEvent) - Method in class cage.TargetPanel.FilePanelActionListener

actionPerformed(ActionEvent) - Method in class cage.utility.OnActionClicker

actionPerformed(ActionEvent) - Method in class cage.utility.OnActionClickerLayoutSwitcher

actionPerformed(ActionEvent) - Method in class cage.utility.OnActionFocusSwitcher

actionPerformed(ActionEvent) - Method in class cage.viewer.jmol.JmolAction

actionPerformed(ActionEvent) - Method in class cage.viewer.jmol.JmolColorAction

actionPerformed(ActionEvent) - Method in class cage.viewer.jmol.JmolExportImageAction

actionPerformed(ActionEvent) - Method in class cage.viewer.jmol.ShowWindowAction

actionPerformed(ActionEvent) - Method in class cage.viewer.TwoView

actionPerformed(ActionEvent) - Method in class lisken.uitoolbox.FlaggedJDialog

actionPerformed(ActionEvent) - Method in class lisken.uitoolbox.MinMaxEqListener

actionPerformed(ActionEvent) - Method in class lisken.uitoolbox.SpinButton

actionPerformed(ActionEvent) - Method in class lisken.uitoolbox.Wizard

active() - Method in class cage.BackgroundWindow

add(AbstractButton) - Method in class cage.utility.AbstractButtonGroup

Add button to this group and this as listener to that button.

add(AbstractButton) - Method in interface cage.utility.GenericButtonGroup

Add button to this group.

add(AbstractButton) - Method in class cage.utility.Min1ButtonGroup

add(AbstractButton) - Method in class cage.utility.SyncButtonGroup

add(Exception) - Method in exception lisken.systoolbox.ExceptionGroup

addActionListener(ActionListener) - Method in class cage.TargetPanel

addArray(Vector, Object[]) - Static method in class lisken.systoolbox.Systoolbox

Utility method to add all elements of an array to a vector.

addChangeListener(ChangeListener) - Method in class cage.generator.SizeOptionsMap

Add a ChangeListener to this object.

addChangeListener(ChangeListener) - Method in class lisken.uitoolbox.EnhancedSlider

addChangeListener(ChangeListener) - Method in class lisken.uitoolbox.SpinButton

addComponent(Component) - Method in class cage.utility.ComponentLogicalGroup

Adds the specified component to this group.

addEdge(int) - Method in interface cage.EmbeddableGraph

Adds an edge from the last added vertex to a to.

addEdge(int) - Method in class cage.NativeEmbeddableGraph

addExitOnEscape(RootPaneContainer) - Static method in class lisken.uitoolbox.UItoolbox

Registers an ActionListener with the root pane of a container so that the program exits upon pressing the escape key.

addExtension() - Method in class cage.FileFormatBox

Add an extension to the content of the corresponding text field.

addExtension() - Method in class cage.SaveDialog

addGraph(EmbeddableGraph, int) - Method in class cage.CaGeResultList

addIfSelected(Vector, AbstractButton, String) - Static method in class cage.Utils

addIfSelected(Vector, AbstractButton, String[]) - Static method in class cage.Utils

addLabel(JSlider, int) - Static method in class lisken.uitoolbox.UItoolbox

addPropertyChangeListener(PropertyChangeListener) - Method in class cage.BackgroundRunner

addPropertyChangeListener(PropertyChangeListener) - Method in class cage.CaGePipe

addPropertyChangeListener(PropertyChangeListener) - Method in interface cage.CaGeRunner

addPropertyChangeListener(PropertyChangeListener) - Method in class cage.FoldnetThread

addResult(CaGeResult) - Method in class cage.CaGeResultList

addRunner(BackgroundRunner) - Method in class cage.BackgroundWindow

addTab(String, GeneratorPanel) - Method in class cage.CombinedGeneratorPanel

Adds panel to the tabbed pane, sets a border for it and then calls all of the WizardAwareComponent methods.

addTo(JPanel) - Method in class cage.generator.SizeOption

addTo(JPanel, boolean, boolean) - Method in class cage.generator.SizeOption

addVertex() - Method in interface cage.EmbeddableGraph

Adds a vertex to this graph.

addVertex() - Method in class cage.NativeEmbeddableGraph

adjustActiveRunners(int) - Method in class cage.BackgroundWindow

adjustDisplayedRunners(int) - Method in class cage.BackgroundWindow

adjustValueLabelLocation() - Method in class lisken.uitoolbox.EnhancedSlider

ADVANCE_LEVEL - Static variable in class cage.ResultPanel

advanceBy(int) - Method in class cage.CaGePipe

advanceBy(int) - Method in class cage.NativeCaGePipe

ALL_EXPERT_MODES - Static variable in class cage.GeneratorInfo

The all expert mode constant.

allowEmptySelection(boolean) - Method in class lisken.uitoolbox.OrderedChoice

askForExit() - Method in class cage.BackgroundWindow

AutosizedTextArea - Class in lisken.uitoolbox

Extension of JTextArea that automatically recalculates its size whenever the text, font or border changes.

AutosizedTextArea() - Constructor for class lisken.uitoolbox.AutosizedTextArea

available() - Method in class lisken.systoolbox.BufferedFDInputStream