cage.writer
Class NativePDBWriter

java.lang.Object
  cage.writer.CaGeWriter
      cage.writer.AbstractChemicalWriter
          cage.writer.NativePDBWriter

All Implemented Interfaces:

CaGeOutlet

public class NativePDBWriter
extends AbstractChemicalWriter

Constructor Summary

NativePDBWriter()

Method Summary

java.lang.String	encodeResult(CaGeResult result)
java.lang.String	getFileExtension()
java.lang.String	getFormatName()
void	outputResult(CaGeResult result) Does the actual output of a result.

Methods inherited from class cage.writer.AbstractChemicalWriter

setGeneratorInfo

Methods inherited from class cage.writer.CaGeWriter

getDimension, lastIOException, setDimension, setOutputStream, stop, throwLastIOException, usesInfo, wasIOException

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NativePDBWriter

public NativePDBWriter()

Method Detail

getFormatName

public java.lang.String getFormatName()

Specified by:

getFormatName in class CaGeWriter

getFileExtension

public java.lang.String getFileExtension()

Specified by:

getFileExtension in class CaGeWriter

encodeResult

public java.lang.String encodeResult(CaGeResult result)

Specified by:

encodeResult in class AbstractChemicalWriter

outputResult

public void outputResult(CaGeResult result)

Description copied from interface: CaGeOutlet

Does the actual output of a result. This method takes the graph, wrapped in a CaGeResult object, as input and performs the method of output specific to this outlet.

Parameters:

result - a CaGeResult object that needs to be outputted.