Uses of Package
cage

Packages that use cage
cage Contains the main classes for the Java GUI of CaGe. 
cage.generator Contains the panels used to configure the different generators in CaGe. 
cage.viewer Contains the different Viewers that can be used in CaGe. 
cage.viewer.jmol Provides an interface to Jmol that can be used to visualize graphs in CaGe. 
cage.viewer.twoview Contains the classes needed for TwoView
cage.writer Contains several writers which can export a graph to a certain format. 
 

Classes in cage used by cage
BackgroundRunner
           
BackgroundWindow
           
CaGePipe
           
CaGeResult
           
CaGeRunner
           
EdgeIterator
          Extension of the interface Iterator with an extra method to iterate over edges directly.
ElementRule
          An ElementRule object can be used to deduce the chemical element of an atom corresponding with a certain vertex in a graph.
EmbeddableGraph
           
Embedder
           
EmbeddingTypeFactory
          Interface that defines a factory for embedding types.
EmbedThread
           
EmbedThreadListener
           
FileFormatBox
          Combobox for selecting a file format.
FoldnetThread
           
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.
GeneratorListener
           
GeneratorPanel
           
OutputPanel
           
SaveDialog
           
TargetPanel
          Panel that allows the selection of a certain target (i.e.
 

Classes in cage used by cage.generator
CombinedGeneratorPanel
          GeneratorPanel that combines several GeneratorPanels on a JTabbedPane.
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.
GeneratorPanel
           
 

Classes in cage used by cage.viewer
CaGeOutlet
          An interface common to all possible types of output in CaGe, i.e.
CaGeResult
           
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.
ResultPanel
           
 

Classes in cage used by cage.viewer.jmol
EmbeddableGraph
           
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.
 

Classes in cage used by cage.viewer.twoview
CaGeResult
           
EmbeddableGraph
           
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.
ResultPanel
           
 

Classes in cage used by cage.writer
CaGeOutlet
          An interface common to all possible types of output in CaGe, i.e.
CaGeResult
           
GeneratorInfo
          Abstract class that represents the settings for a CaGe generator.